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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2017-02-16 10:53:34 +0100 |
|---|---|---|
| committer |   Justin Lecher <jlec@gentoo.org> | 2017-03-18 21:06:54 +0000 |
| commit | 9819dadc1f41b04327d05561da751bb380071ba5 (patch) | |
| tree | 999a26220ec6d255940074ee604b1822f36d8a79 | |
| parent | Offline work (diff) | |
| download | sci-9819dadc1f41b04327d05561da751bb380071ba5.tar.gz sci-9819dadc1f41b04327d05561da751bb380071ba5.tar.bz2 sci-9819dadc1f41b04327d05561da751bb380071ba5.zip | |
sci-biology/freebayes: force compilation in a single thread as parallel build fails
Package-Manager: Portage-2.3.3, Repoman-2.3.1
| -rw-r--r-- | sci-biology/freebayes/freebayes-9999.ebuild | 4 |
1 files changed, 4 insertions, 0 deletions
diff --git a/sci-biology/freebayes/freebayes-9999.ebuild b/sci-biology/freebayes/freebayes-9999.ebuild index 896c4cfb7..1b1eb89ed 100644 --- a/sci-biology/freebayes/freebayes-9999.ebuild +++ b/sci-biology/freebayes/freebayes-9999.ebuild @@ -84,6 +84,10 @@ RDEPEND="${DEPEND} # g++ -O3 -D_FILE_OFFSET_BITS=64 -g -I../ttmath -I../bamtools/src/ -I../vcflib/src/ -I../vcflib/tabixpp/ -I../vcflib/smithwaterman/ -I../vcflib/multichoose/ -I../vcflib/filevercmp/ -I../vcflib/tabixpp/htslib -I../SeqLib -I../SeqLib/htslib -c freebayes.cpp +src_compile(){ + emake -j1 # vcflib/smithwaterman/ sometimes does not compile +} + src_install(){ dobin bin/freebayes bin/bamleftalign } |