diff options
| author |   Andrey Kislyuk <weaver@gentoo.org> | 2010-09-26 07:35:37 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2010-09-26 07:35:37 +0000 |
| commit | 47e251e3d8cd2c938a07acc055f82e43572b73e0 (patch) | |
| tree | cce8b765ccfa1e69c6924f9995a7d1eb4358d40e /sci-biology/abyss | |
| parent | Version bump (diff) | |
| download | gentoo-2-47e251e3d8cd2c938a07acc055f82e43572b73e0.tar.gz gentoo-2-47e251e3d8cd2c938a07acc055f82e43572b73e0.tar.bz2 gentoo-2-47e251e3d8cd2c938a07acc055f82e43572b73e0.zip | |
Version bump
(Portage version: 2.2_rc61/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology/abyss')
| -rw-r--r-- | sci-biology/abyss/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/abyss/abyss-1.2.3.ebuild | 25 |
2 files changed, 31 insertions, 1 deletions
diff --git a/sci-biology/abyss/ChangeLog b/sci-biology/abyss/ChangeLog index 8a29da5e2b91..4ddd2bf44bfc 100644 --- a/sci-biology/abyss/ChangeLog +++ b/sci-biology/abyss/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/abyss # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/ChangeLog,v 1.5 2010/06/23 05:19:31 weaver Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/ChangeLog,v 1.6 2010/09/26 07:35:37 weaver Exp $ + +*abyss-1.2.3 (26 Sep 2010) + + 26 Sep 2010; Andrey Kislyuk <weaver@gentoo.org> +abyss-1.2.3.ebuild: + Version bump *abyss-1.2.0 (23 Jun 2010) diff --git a/sci-biology/abyss/abyss-1.2.3.ebuild b/sci-biology/abyss/abyss-1.2.3.ebuild new file mode 100644 index 000000000000..be8ea6eebabd --- /dev/null +++ b/sci-biology/abyss/abyss-1.2.3.ebuild @@ -0,0 +1,25 @@ +# Copyright 1999-2010 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/abyss-1.2.3.ebuild,v 1.1 2010/09/26 07:35:37 weaver Exp $ + +EAPI="2" + +DESCRIPTION="Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler" +HOMEPAGE="http://www.bcgsc.ca/platform/bioinfo/software/abyss" +SRC_URI="http://www.bcgsc.ca/downloads/abyss/${P}.tar.gz" + +LICENSE="abyss" +SLOT="0" +IUSE="+mpi" +KEYWORDS="~amd64 ~x86" + +DEPEND="dev-cpp/sparsehash + mpi? ( virtual/mpi )" +RDEPEND="${DEPEND}" + +# todo: --enable-maxk=N configure option +# todo: fix automagic mpi toggling + +src_install() { + einstall || die +} |