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| author |   Markus Dittrich <markusle@gentoo.org> | 2008-10-11 11:19:37 +0000 |
|---|---|---|
| committer | Markus Dittrich <markusle@gentoo.org> | 2008-10-11 11:19:37 +0000 |
| commit | bfb9f16867539442cb3d7e11a325cddb9764614f (patch) | |
| tree | c998c0e8b9c2bfd15531ebb6d38078ac74d9b615 /sci-chemistry | |
| parent | Stable on sparc, bug #240102 (diff) | |
| download | gentoo-2-bfb9f16867539442cb3d7e11a325cddb9764614f.tar.gz gentoo-2-bfb9f16867539442cb3d7e11a325cddb9764614f.tar.bz2 gentoo-2-bfb9f16867539442cb3d7e11a325cddb9764614f.zip | |
Added missing numpy dependency and fixed LDFLAGS issue (see bug #241178).
(Portage version: 2.2_rc11/cvs/Linux 2.6.26-SENTINEL-2 i686)
Diffstat (limited to 'sci-chemistry')
| -rw-r--r-- | sci-chemistry/pdb2pqr/ChangeLog | 6 | ||||
| -rw-r--r-- | sci-chemistry/pdb2pqr/files/pdb2pqr-1.3.0-ldflags.patch | 12 | ||||
| -rw-r--r-- | sci-chemistry/pdb2pqr/pdb2pqr-1.3.0.ebuild | 6 |
3 files changed, 21 insertions, 3 deletions
diff --git a/sci-chemistry/pdb2pqr/ChangeLog b/sci-chemistry/pdb2pqr/ChangeLog index 698875659358..cbfff3560836 100644 --- a/sci-chemistry/pdb2pqr/ChangeLog +++ b/sci-chemistry/pdb2pqr/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-chemistry/pdb2pqr # Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb2pqr/ChangeLog,v 1.12 2008/06/19 13:02:12 markusle Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb2pqr/ChangeLog,v 1.13 2008/10/11 11:19:36 markusle Exp $ + + 11 Oct 2008; Markus Dittrich <markusle@gentoo.org> + +files/pdb2pqr-1.3.0-ldflags.patch, pdb2pqr-1.3.0.ebuild: + Added missing numpy dependency and fixed LDFLAGS issue (see bug #241178). 19 Jun 2008; Markus Dittrich <markusle@gentoo.org> +files/pdb2pqr-1.3.0-gcc4.3.patch, pdb2pqr-1.3.0.ebuild: diff --git a/sci-chemistry/pdb2pqr/files/pdb2pqr-1.3.0-ldflags.patch b/sci-chemistry/pdb2pqr/files/pdb2pqr-1.3.0-ldflags.patch new file mode 100644 index 000000000000..57f02f264ba8 --- /dev/null +++ b/sci-chemistry/pdb2pqr/files/pdb2pqr-1.3.0-ldflags.patch @@ -0,0 +1,12 @@ +diff -Naur pdb2pqr-1.3.0/propka/Makefile.in pdb2pqr-1.3.0.new/propka/Makefile.in +--- pdb2pqr-1.3.0/propka/Makefile.in 2007-10-11 18:26:48.000000000 -0400 ++++ pdb2pqr-1.3.0.new/propka/Makefile.in 2008-10-11 07:10:51.000000000 -0400 +@@ -169,7 +169,7 @@ + -test -z "$(noinst_PROGRAMS)" || rm -f $(noinst_PROGRAMS) + _propkalib.so$(EXEEXT): $(_propkalib_so_OBJECTS) $(_propkalib_so_DEPENDENCIES) + @rm -f _propkalib.so$(EXEEXT) +- $(_propkalib_so_LINK) $(_propkalib_so_LDFLAGS) $(_propkalib_so_OBJECTS) $(_propkalib_so_LDADD) $(LIBS) ++ $(_propkalib_so_LINK) $(_propkalib_so_LDFLAGS) $(LDFLAGS) $(_propkalib_so_OBJECTS) $(_propkalib_so_LDADD) $(LIBS) + propka$(EXEEXT): $(propka_OBJECTS) $(propka_DEPENDENCIES) + @rm -f propka$(EXEEXT) + $(F77LINK) $(propka_LDFLAGS) $(propka_OBJECTS) $(propka_LDADD) $(LIBS) diff --git a/sci-chemistry/pdb2pqr/pdb2pqr-1.3.0.ebuild b/sci-chemistry/pdb2pqr/pdb2pqr-1.3.0.ebuild index 425b8c037469..799ebef3129b 100644 --- a/sci-chemistry/pdb2pqr/pdb2pqr-1.3.0.ebuild +++ b/sci-chemistry/pdb2pqr/pdb2pqr-1.3.0.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2008 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb2pqr/pdb2pqr-1.3.0.ebuild,v 1.2 2008/06/19 13:02:12 markusle Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb2pqr/pdb2pqr-1.3.0.ebuild,v 1.3 2008/10/11 11:19:36 markusle Exp $ inherit eutils fortran multilib flag-o-matic distutils @@ -13,7 +13,8 @@ SLOT="0" IUSE="" KEYWORDS="~amd64 ~x86" -DEPEND="dev-lang/python" +DEPEND="dev-lang/python + dev-python/numpy" FORTRAN="g77 gfortran" @@ -21,6 +22,7 @@ src_unpack() { unpack ${A} cd "${S}" epatch "${FILESDIR}"/${P}-gcc4.3.patch + epatch "${FILESDIR}"/${P}-ldflags.patch } src_compile() { |