diff options
Diffstat (limited to 'sci-chemistry/pymol/files/pymol-1.2.2-data-path.patch')
| -rw-r--r-- | sci-chemistry/pymol/files/pymol-1.2.2-data-path.patch | 75 |
1 files changed, 0 insertions, 75 deletions
diff --git a/sci-chemistry/pymol/files/pymol-1.2.2-data-path.patch b/sci-chemistry/pymol/files/pymol-1.2.2-data-path.patch deleted file mode 100644 index cf1bf59af0c6..000000000000 --- a/sci-chemistry/pymol/files/pymol-1.2.2-data-path.patch +++ /dev/null @@ -1,75 +0,0 @@ -Index: modules/pymol/importing.py -=================================================================== ---- modules/pymol/importing.py (revision 3889) -+++ modules/pymol/importing.py (working copy) -@@ -191,7 +191,7 @@ - ''' - r = DEFAULT_ERROR - -- tables = { 'cmyk' : "$PYMOL_PATH/data/pymol/cmyk.png", -+ tables = { 'cmyk' : "$PYMOL_DATA/pymol/cmyk.png", - 'pymol' : 'pymol', - 'rgb' : 'rgb', - 'greyscale': 'greyscale' } -Index: modules/pymol/wizard/mutagenesis.py -=================================================================== ---- modules/pymol/wizard/mutagenesis.py (revision 3889) -+++ modules/pymol/wizard/mutagenesis.py (working copy) -@@ -53,8 +53,8 @@ - - self.dep = default_dep - -- self.ind_library = io.pkl.fromFile(os.environ['PYMOL_PATH']+ -- "/data/chempy/sidechains/sc_bb_ind.pkl") -+ self.ind_library = io.pkl.fromFile(os.environ['PYMOL_DATA']+ -+ "/chempy/sidechains/sc_bb_ind.pkl") - self.load_library() - self.status = 0 # 0 no selection, 1 mutagenizing - self.bump_check = 1 -@@ -218,8 +218,8 @@ - def load_library(self): - if self.dep == 'dep': - if not hasattr(self,'dep_library'): -- self.dep_library = io.pkl.fromFile(os.environ['PYMOL_PATH']+ -- "/data/chempy/sidechains/sc_bb_dep.pkl") -+ self.dep_library = io.pkl.fromFile(os.environ['PYMOL_DATA']+ -+ "/chempy/sidechains/sc_bb_dep.pkl") - - def set_mode(self,mode): - cmd=self.cmd -Index: modules/pymol/commanding.py -=================================================================== ---- modules/pymol/commanding.py (revision 3889) -+++ modules/pymol/commanding.py (working copy) -@@ -219,11 +219,11 @@ - _self.unlock(0,_self) - r = DEFAULT_SUCCESS - if show_splash==1: # generic / open-source -- png_path = _self.exp_path("$PYMOL_PATH/data/pymol/splash.png") -+ png_path = _self.exp_path("$PYMOL_DATA/pymol/splash.png") - elif show_splash==2: # evaluation builds -- png_path = _self.exp_path("$PYMOL_PATH/data/pymol/epymol.png") -+ png_path = _self.exp_path("$PYMOL_DATA/pymol/epymol.png") - else: # incentive builds -- png_path = _self.exp_path("$PYMOL_PATH/data/pymol/ipymol.png") -+ png_path = _self.exp_path("$PYMOL_DATA/pymol/ipymol.png") - if os.path.exists(png_path): - _self.do("_ cmd.load_png('%s',0,quiet=1)"%png_path) - else: -Index: modules/chempy/tinker/__init__.py -=================================================================== ---- modules/chempy/tinker/__init__.py (revision 3889) -+++ modules/chempy/tinker/__init__.py (working copy) -@@ -145,9 +145,9 @@ - bin_path = '' - params_path = '' - --if os.environ.has_key('PYMOL_PATH'): -- pymol_path = os.environ['PYMOL_PATH'] -- test_path = pymol_path + '/data/chempy/tinker/' -+if os.environ.has_key('PYMOL_DATA'): -+ pymol_path = os.environ['PYMOL_DATA'] -+ test_path = pymol_path + '/chempy/tinker/' - if os.path.exists(test_path): - params_path = test_path - |