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| author |   Andrey Kislyuk <weaver@gentoo.org> | 2009-11-20 19:02:25 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2009-11-20 19:02:25 +0000 |
| commit | 42f9b687c58bccb2a9c6d9204380a17900f0d5e6 (patch) | |
| tree | 6146e0664248e48cde31a7c2c0f29b06081f1de7 /sci-biology/mosaik | |
| parent | Drop arts support in kde.eclass (diff) | |
| download | historical-42f9b687c58bccb2a9c6d9204380a17900f0d5e6.tar.gz historical-42f9b687c58bccb2a9c6d9204380a17900f0d5e6.tar.bz2 historical-42f9b687c58bccb2a9c6d9204380a17900f0d5e6.zip | |
New package, ebuild written by me
Package-Manager: portage-2.2_rc30/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/mosaik')
| -rw-r--r-- | sci-biology/mosaik/ChangeLog | 10 | ||||
| -rw-r--r-- | sci-biology/mosaik/Manifest | 4 | ||||
| -rw-r--r-- | sci-biology/mosaik/metadata.xml | 9 | ||||
| -rw-r--r-- | sci-biology/mosaik/mosaik-1.0.1367.ebuild | 34 |
4 files changed, 57 insertions, 0 deletions
diff --git a/sci-biology/mosaik/ChangeLog b/sci-biology/mosaik/ChangeLog new file mode 100644 index 000000000000..269f25da0eeb --- /dev/null +++ b/sci-biology/mosaik/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for sci-biology/mosaik +# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mosaik/ChangeLog,v 1.1 2009/11/20 19:02:25 weaver Exp $ + +*mosaik-1.0.1367 (20 Nov 2009) + + 20 Nov 2009; Andrey Kislyuk <weaver@gentoo.org> +metadata.xml, + +mosaik-1.0.1367.ebuild: + New package, ebuild written by me + diff --git a/sci-biology/mosaik/Manifest b/sci-biology/mosaik/Manifest new file mode 100644 index 000000000000..4062ff3d3747 --- /dev/null +++ b/sci-biology/mosaik/Manifest @@ -0,0 +1,4 @@ +DIST Mosaik-1.0.1367-source.tar.bz2 8700231 RMD160 f533d05e71d9bea773efd90548756f88366b214c SHA1 6e33533861965b29c5cf80c1d5f1b1742924a6d7 SHA256 2a6ee1d25af835028b71f2518c6a00e929e64e7be6305183dfe0e242a015c750 +EBUILD mosaik-1.0.1367.ebuild 808 RMD160 a118d8cb9bd8b94d6db13d9fc0593ef673eeb56f SHA1 d4c9ca52fe8494a769f889adde7235e0aabf7173 SHA256 9f3541830081da84854fa0d2344f23f5fc5a3dc93b7df909872c8e407830e154 +MISC ChangeLog 370 RMD160 2091d199eab2716105cdab36315f2a6657fd7ae7 SHA1 8929c0871773e9e6d9b6743fc230c4c1fcb36aaf SHA256 f42be505b5960228f3c8c3386ad49a7ed1d93e56b43a15cf372d463dbf3a2183 +MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110 diff --git a/sci-biology/mosaik/metadata.xml b/sci-biology/mosaik/metadata.xml new file mode 100644 index 000000000000..3302123e5718 --- /dev/null +++ b/sci-biology/mosaik/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>weaver@gentoo.org</email> + <name>Andrey Kislyuk</name> + </maintainer> + <herd>sci-biology</herd> +</pkgmetadata> diff --git a/sci-biology/mosaik/mosaik-1.0.1367.ebuild b/sci-biology/mosaik/mosaik-1.0.1367.ebuild new file mode 100644 index 000000000000..b86d8d5ef546 --- /dev/null +++ b/sci-biology/mosaik/mosaik-1.0.1367.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2009 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mosaik/mosaik-1.0.1367.ebuild,v 1.1 2009/11/20 19:02:25 weaver Exp $ + +EAPI="2" + +DESCRIPTION="A reference-guided aligner for next-generation sequencing technologies" +HOMEPAGE="http://code.google.com/p/mosaik-aligner/" +SRC_URI="http://mosaik-aligner.googlecode.com/files/Mosaik-${PV}-source.tar.bz2" + +LICENSE="GPL-2" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86" + +DEPEND="" +RDEPEND="" + +S="${WORKDIR}/${PN}-source" + +src_compile() { + emake -C src || die +# emake -C MosaikTools/c++ || die +# emake -C MosaikTools/perl || die +} + +src_install() { + dobin bin/* || die + + insinto /usr/share/${PN} + doins -r MosaikTools || die + + dodoc README Mosaik-1.0-Documentation.pdf +} |