summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorUlrich Müller <ulm@gentoo.org>2010-10-10 21:22:56 +0000
committerUlrich Müller <ulm@gentoo.org>2010-10-10 21:22:56 +0000
commitb1debf67788c8c15e1734e883944fa8ff493c3dc (patch)
tree2cf8344948b82a5502c69916095740d7ceab7ab7 /sci-biology
parentversion bump (diff)
downloadhistorical-b1debf67788c8c15e1734e883944fa8ff493c3dc.tar.gz
historical-b1debf67788c8c15e1734e883944fa8ff493c3dc.tar.bz2
historical-b1debf67788c8c15e1734e883944fa8ff493c3dc.zip
Fix openmotif dependency.
Package-Manager: portage-2.1.9.14/cvs/Linux x86_64
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/arb/ChangeLog5
-rw-r--r--sci-biology/arb/arb-5.1-r1.ebuild4
-rw-r--r--sci-biology/clustalx/ChangeLog7
-rw-r--r--sci-biology/clustalx/clustalx-1.83-r2.ebuild6
-rw-r--r--sci-biology/consed/ChangeLog6
-rw-r--r--sci-biology/consed/consed-19-r1.ebuild6
-rw-r--r--sci-biology/consed/consed-19-r2.ebuild4
-rw-r--r--sci-biology/ncbi-tools/ChangeLog7
-rw-r--r--sci-biology/ncbi-tools/ncbi-tools-20080302.ebuild8
-rw-r--r--sci-biology/ncbi-tools/ncbi-tools-20090809-r2.ebuild4
-rw-r--r--sci-biology/ncbi-tools/ncbi-tools-20090809.ebuild4
-rw-r--r--sci-biology/ncbi-tools/ncbi-tools-20100808.ebuild4
12 files changed, 42 insertions, 23 deletions
diff --git a/sci-biology/arb/ChangeLog b/sci-biology/arb/ChangeLog
index cf8df2c3823b..561f92346f20 100644
--- a/sci-biology/arb/ChangeLog
+++ b/sci-biology/arb/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/arb
# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/arb/ChangeLog,v 1.3 2010/09/16 17:21:30 scarabeus Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/arb/ChangeLog,v 1.4 2010/10/10 21:16:13 ulm Exp $
+
+ 10 Oct 2010; Ulrich Mueller <ulm@gentoo.org> arb-5.1-r1.ebuild:
+ Fix openmotif dependency.
16 Sep 2010; Tomáš Chvátal <scarabeus@gentoo.org> arb-5.1-r1.ebuild:
virtual/glut -> media-libs/glut
diff --git a/sci-biology/arb/arb-5.1-r1.ebuild b/sci-biology/arb/arb-5.1-r1.ebuild
index 73e5e1212365..e4e232994bef 100644
--- a/sci-biology/arb/arb-5.1-r1.ebuild
+++ b/sci-biology/arb/arb-5.1-r1.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/arb/arb-5.1-r1.ebuild,v 1.2 2010/09/16 17:21:30 scarabeus Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/arb/arb-5.1-r1.ebuild,v 1.3 2010/10/10 21:16:13 ulm Exp $
EAPI="2"
@@ -22,7 +22,7 @@ KEYWORDS="~amd64 ~x86"
DEPEND="
app-text/sablotron
www-client/lynx
- x11-libs/openmotif
+ >=x11-libs/openmotif-2.3:0
x11-libs/libXpm
x11-libs/libXaw
media-libs/tiff
diff --git a/sci-biology/clustalx/ChangeLog b/sci-biology/clustalx/ChangeLog
index cc7f5eb80977..15cfc808eb01 100644
--- a/sci-biology/clustalx/ChangeLog
+++ b/sci-biology/clustalx/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/clustalx
-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/ChangeLog,v 1.20 2009/10/31 18:05:39 maekke Exp $
+# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/ChangeLog,v 1.21 2010/10/10 21:18:22 ulm Exp $
+
+ 10 Oct 2010; Ulrich Mueller <ulm@gentoo.org> clustalx-1.83-r2.ebuild:
+ Fix openmotif dependency.
31 Oct 2009; Markus Meier <maekke@gentoo.org> clustalx-2.0.11.ebuild:
amd64/x86 stable, bug #290938
diff --git a/sci-biology/clustalx/clustalx-1.83-r2.ebuild b/sci-biology/clustalx/clustalx-1.83-r2.ebuild
index f2de82939a99..3539cc3e775c 100644
--- a/sci-biology/clustalx/clustalx-1.83-r2.ebuild
+++ b/sci-biology/clustalx/clustalx-1.83-r2.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2008 Gentoo Foundation
+# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/clustalx-1.83-r2.ebuild,v 1.8 2008/08/27 23:15:53 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/clustalx-1.83-r2.ebuild,v 1.9 2010/10/10 21:18:22 ulm Exp $
EAPI=1
@@ -17,7 +17,7 @@ IUSE=""
DEPEND="sci-biology/clustalw:1
sci-biology/ncbi-tools
- x11-libs/openmotif
+ >=x11-libs/openmotif-2.3:0
x11-libs/libXpm"
S="${WORKDIR}/${PN}${PV}.sun"
diff --git a/sci-biology/consed/ChangeLog b/sci-biology/consed/ChangeLog
index 89c1839cd206..5492236ce93d 100644
--- a/sci-biology/consed/ChangeLog
+++ b/sci-biology/consed/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/consed
# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/consed/ChangeLog,v 1.3 2010/05/22 08:53:37 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/consed/ChangeLog,v 1.4 2010/10/10 21:20:04 ulm Exp $
+
+ 10 Oct 2010; Ulrich Mueller <ulm@gentoo.org> consed-19-r1.ebuild,
+ consed-19-r2.ebuild:
+ Fix openmotif dependency.
*consed-19-r2 (22 May 2010)
diff --git a/sci-biology/consed/consed-19-r1.ebuild b/sci-biology/consed/consed-19-r1.ebuild
index cb85bd73368d..da9480805707 100644
--- a/sci-biology/consed/consed-19-r1.ebuild
+++ b/sci-biology/consed/consed-19-r1.ebuild
@@ -1,6 +1,8 @@
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/consed/consed-19-r1.ebuild,v 1.2 2010/05/22 08:53:37 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/consed/consed-19-r1.ebuild,v 1.3 2010/10/10 21:20:04 ulm Exp $
+
+EAPI=1
inherit toolchain-funcs
@@ -14,7 +16,7 @@ SLOT="0"
KEYWORDS="~x86 ~amd64"
IUSE=""
-DEPEND="x11-libs/openmotif"
+DEPEND=">=x11-libs/openmotif-2.3:0"
RDEPEND="${DEPEND}
>=sci-biology/phred-000925
>=sci-biology/phrap-1.080721"
diff --git a/sci-biology/consed/consed-19-r2.ebuild b/sci-biology/consed/consed-19-r2.ebuild
index 32b281e0cf99..d08626ddeded 100644
--- a/sci-biology/consed/consed-19-r2.ebuild
+++ b/sci-biology/consed/consed-19-r2.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/consed/consed-19-r2.ebuild,v 1.1 2010/05/22 08:53:37 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/consed/consed-19-r2.ebuild,v 1.2 2010/10/10 21:20:04 ulm Exp $
EAPI=3
@@ -16,7 +16,7 @@ SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE=""
-DEPEND="x11-libs/openmotif"
+DEPEND=">=x11-libs/openmotif-2.3:0"
RDEPEND="${DEPEND}
>=sci-biology/phred-000925
>=sci-biology/phrap-1.080721"
diff --git a/sci-biology/ncbi-tools/ChangeLog b/sci-biology/ncbi-tools/ChangeLog
index de99bb217865..9e6e193665c6 100644
--- a/sci-biology/ncbi-tools/ChangeLog
+++ b/sci-biology/ncbi-tools/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/ncbi-tools
# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ChangeLog,v 1.79 2010/09/30 17:41:44 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ChangeLog,v 1.80 2010/10/10 21:22:56 ulm Exp $
+
+ 10 Oct 2010; Ulrich Mueller <ulm@gentoo.org> ncbi-tools-20080302.ebuild,
+ ncbi-tools-20090809.ebuild, ncbi-tools-20090809-r2.ebuild,
+ ncbi-tools-20100808.ebuild:
+ Fix openmotif dependency.
*ncbi-tools-20100808 (30 Sep 2010)
diff --git a/sci-biology/ncbi-tools/ncbi-tools-20080302.ebuild b/sci-biology/ncbi-tools/ncbi-tools-20080302.ebuild
index 83de27a1a36a..1378cc1083e1 100644
--- a/sci-biology/ncbi-tools/ncbi-tools-20080302.ebuild
+++ b/sci-biology/ncbi-tools/ncbi-tools-20080302.ebuild
@@ -1,6 +1,8 @@
-# Copyright 1999-2008 Gentoo Foundation
+# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20080302.ebuild,v 1.5 2008/06/27 10:23:37 ulm Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20080302.ebuild,v 1.6 2010/10/10 21:22:56 ulm Exp $
+
+EAPI=1
inherit flag-o-matic toolchain-funcs eutils autotools
@@ -24,7 +26,7 @@ IUSE="doc X"
RDEPEND="app-shells/tcsh
dev-lang/perl
media-libs/libpng
- X? ( x11-libs/openmotif )"
+ X? ( >=x11-libs/openmotif-2.3:0 )"
DEPEND="${RDEPEND}
sys-devel/pmake"
diff --git a/sci-biology/ncbi-tools/ncbi-tools-20090809-r2.ebuild b/sci-biology/ncbi-tools/ncbi-tools-20090809-r2.ebuild
index 9488963732d0..4669db0981d4 100644
--- a/sci-biology/ncbi-tools/ncbi-tools-20090809-r2.ebuild
+++ b/sci-biology/ncbi-tools/ncbi-tools-20090809-r2.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20090809-r2.ebuild,v 1.1 2010/03/07 09:24:52 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20090809-r2.ebuild,v 1.2 2010/10/10 21:22:56 ulm Exp $
EAPI="3"
@@ -20,7 +20,7 @@ IUSE="doc X"
RDEPEND="app-shells/tcsh
dev-lang/perl
media-libs/libpng
- X? ( x11-libs/openmotif )"
+ X? ( >=x11-libs/openmotif-2.3:0 )"
DEPEND="${RDEPEND}"
S="${WORKDIR}/ncbi"
diff --git a/sci-biology/ncbi-tools/ncbi-tools-20090809.ebuild b/sci-biology/ncbi-tools/ncbi-tools-20090809.ebuild
index ad145ae048cb..0639b89cc272 100644
--- a/sci-biology/ncbi-tools/ncbi-tools-20090809.ebuild
+++ b/sci-biology/ncbi-tools/ncbi-tools-20090809.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20090809.ebuild,v 1.4 2010/03/29 09:45:07 pacho Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20090809.ebuild,v 1.5 2010/10/10 21:22:56 ulm Exp $
EAPI="2"
@@ -20,7 +20,7 @@ IUSE="doc X"
RDEPEND="app-shells/tcsh
dev-lang/perl
media-libs/libpng
- X? ( x11-libs/openmotif )"
+ X? ( >=x11-libs/openmotif-2.3:0 )"
DEPEND="${RDEPEND}"
S="${WORKDIR}/ncbi"
diff --git a/sci-biology/ncbi-tools/ncbi-tools-20100808.ebuild b/sci-biology/ncbi-tools/ncbi-tools-20100808.ebuild
index ba49d26b2eff..5acb20f98efc 100644
--- a/sci-biology/ncbi-tools/ncbi-tools-20100808.ebuild
+++ b/sci-biology/ncbi-tools/ncbi-tools-20100808.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20100808.ebuild,v 1.1 2010/09/30 17:41:44 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20100808.ebuild,v 1.2 2010/10/10 21:22:56 ulm Exp $
EAPI="3"
@@ -20,7 +20,7 @@ IUSE="doc X"
RDEPEND="app-shells/tcsh
dev-lang/perl
media-libs/libpng
- X? ( x11-libs/openmotif )"
+ X? ( >=x11-libs/openmotif-2.3:0 )"
DEPEND="${RDEPEND}"
S="${WORKDIR}/ncbi"