Non-maintainer commit: fix build on modern glibc versions (bug #543624, thanks to Andreas Plesch et al.)

Package-Manager: portage-2.2.20/cvs/Linux x86_64
Manifest-Sign-Key: 0x18E5B6F2D8D5EC8D

5 files changed, 67 insertions, 18 deletions

diff --git a/sci-geosciences/gmt/ChangeLog b/sci-geosciences/gmt/ChangeLog
index af9de39ac8b2..b0fee50d213b 100644
--- a/sci-geosciences/gmt/ChangeLog
+++ b/sci-geosciences/gmt/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-geosciences/gmt
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-geosciences/gmt/ChangeLog,v 1.30 2013/02/02 06:40:13 patrick Exp $
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-geosciences/gmt/ChangeLog,v 1.31 2015/07/18 20:10:44 tetromino Exp $
+
+  18 Jul 2015; Alexandre Rostovtsev <tetromino@gentoo.org> gmt-4.5.6.ebuild,
+  gmt-4.5.9.ebuild, +files/gmt-4.5.9-unistd.h.patch:
+  Non-maintainer commit: fix build on modern glibc versions (bug #543624,
+  thanks to Andreas Plesch et al.)
 
 *gmt-4.5.9 (02 Feb 2013)
 
diff --git a/sci-geosciences/gmt/Manifest b/sci-geosciences/gmt/Manifest
index a0a9fc8fa78a..0d218ac81576 100644
--- a/sci-geosciences/gmt/Manifest
+++ b/sci-geosciences/gmt/Manifest
@@ -1,23 +1,46 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA256
+
 AUX gmt-4.5.0-no-strip.patch 1963 SHA256 c08daec9357087e52026faeec2398a888fc0b7c145511f01016734e41bbc1fea SHA512 8ef2ca6acf17b092989ce7b8c91a3f42b82b074d606d2635c7b5a03355fcd3f83b3d08ef83747e51f5eb6e6ed9cb9a683208797d49da7b8f0714ed0c8f2e6155 WHIRLPOOL 6d10111b14637f020d529dedcb248a240a09218e2a06ad43f593400a4ec98763f182c0c8cbf34c53359d15391aeef13a7b0f3e34a4a888af4d056efa95c1bf44
 AUX gmt-4.5.6-respect-ldflags.patch 2396 SHA256 c690c160cd7fad23a0ce0171aae47a4a275ff03203418de27d77fbab5d2b525a SHA512 c2cc4986a1211a75856391cd0c731f37d9cf8e2ad28fdf29f532ed03308f2ef7f309a0bc525bb08c976c4535e8cbe77789546eb8585ddcedf016af32769e5420 WHIRLPOOL 868c7c567f69c1e54dc56b26723e9cef09e03a1cdfd86ad2f2f821dff96aa3f37fe20064c2495bf15cb84f60cec3ddec3fcfbef5712270fe70ce1307d0b6f45b
 AUX gmt-4.5.8-bfr-overflow.patch 1576 SHA256 61602cbdd6d233882b9bda79f96897a1dcd82e5a572267102c61d6b68ec084a2 SHA512 fd2c137047333ef4494bba28339c1f8a34e83acc2646db514e0d2289e60acca5f6ac360d1dab27d84a088ce4a1c8c3af5f5cd4ae57485bb14eb08a668ea8ecc9 WHIRLPOOL 4ae526a59b2776cb54da27b377fdad47d8af344bc44e75bc9a8f21c3eeeca31401abb508f6ec777186bdc27c27744c09e6e8d92770c16b2b27640201c343a131
 AUX gmt-4.5.8-impl-dec.patch 291 SHA256 b244567f01a35515249f85c5a8a4142aa2c1765c51a2b1315860574ba75ee67b SHA512 ed977bd1a19024a60682d6e422c202cb3c29ed5da1450d85558544d6aa300ac967595811c90143a4858213a6b60b8fffee453de8351666c55676371e00b144ad WHIRLPOOL 24b0d923e7f02a521c3692feb8774fde4794d71a91e10ba83fa86bf874ac711eb37844a0b421312635e5cf6e7344cf0ff8e4d7346b27fc45911913529eed6a6b
 AUX gmt-4.5.9-no-strip.patch 1246 SHA256 b72d6528aacd8869bc4d9f00e4d4bc72c1dab8aada2d911f72a36f03ff322b5a SHA512 271be4c32607bd4776cace933ed0a81a76fb5ea8ccc0c92f0f11cdf17f6b4f8740e2345323236af94dd4eb52323625cc82e5c661e22a008dcdc85f4d1d452b23 WHIRLPOOL 485c01f259dca075bbba6f709995488277af410f6adf4a63f2699cee0e8c8dd88ca6e4717a027068b21fb9f5b2908be0b64b7822faa7d8708f115fba03a225f4
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 DIST GSHHS2.1.1_high.tar.bz2 9712697 SHA256 a19e1e4b205419d56ae3dca98a71dd0001eb5aab2ebc5f436c1d7e6e741945c7
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diff --git a/sci-geosciences/gmt/files/gmt-4.5.9-unistd.h.patch b/sci-geosciences/gmt/files/gmt-4.5.9-unistd.h.patch
new file mode 100644
index 000000000000..e724b4ceab79
--- /dev/null
+++ b/sci-geosciences/gmt/files/gmt-4.5.9-unistd.h.patch
@@ -0,0 +1,19 @@
+Fix "gmtdigitize.c:77:2: error: unknown type name 'gid_t'"
+build failure; patch from upstream version 4.5.11
+
+https://bugs.gentoo.org/show_bug.cgi?id=543624
+
+--- a/src/misc/gmtdigitize.c
++++ b/src/misc/gmtdigitize.c
+@@ -37,6 +37,11 @@
+  *
+  */
+  
++#define _XOPEN_SOURCE
++#ifdef HAVE_UNISTD_H
++#include <unistd.h>
++#endif
++
+ #include "gmt.h"
+ 
+ #ifndef WIN32
diff --git a/sci-geosciences/gmt/gmt-4.5.6.ebuild b/sci-geosciences/gmt/gmt-4.5.6.ebuild
index d6082c5096f4..f70f40fbed23 100644
--- a/sci-geosciences/gmt/gmt-4.5.6.ebuild
+++ b/sci-geosciences/gmt/gmt-4.5.6.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2012 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-geosciences/gmt/gmt-4.5.6.ebuild,v 1.6 2012/06/16 16:57:44 ssuominen Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-geosciences/gmt/gmt-4.5.6.ebuild,v 1.7 2015/07/18 20:10:44 tetromino Exp $
 
 EAPI=4
 
@@ -49,7 +49,8 @@ src_prepare() {
 
 	epatch \
 		"${FILESDIR}/${PN}-4.5.0-no-strip.patch" \
-		"${FILESDIR}/${PN}-4.5.6-respect-ldflags.patch"
+		"${FILESDIR}/${PN}-4.5.6-respect-ldflags.patch" \
+		"${FILESDIR}"/${PN}-4.5.9-unistd.h.patch
 
 	eautoreconf
 }
diff --git a/sci-geosciences/gmt/gmt-4.5.9.ebuild b/sci-geosciences/gmt/gmt-4.5.9.ebuild
index 4eba3599b40b..6d139eedb89c 100644
--- a/sci-geosciences/gmt/gmt-4.5.9.ebuild
+++ b/sci-geosciences/gmt/gmt-4.5.9.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-geosciences/gmt/gmt-4.5.9.ebuild,v 1.1 2013/02/02 06:40:13 patrick Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-geosciences/gmt/gmt-4.5.9.ebuild,v 1.2 2015/07/18 20:10:44 tetromino Exp $
 
 EAPI=4
 
@@ -42,6 +42,7 @@ MAKEOPTS+=" -j1"
 PATCHES=(
 	"${FILESDIR}"/${PN}-4.5.9-no-strip.patch
 	"${FILESDIR}"/${PN}-4.5.6-respect-ldflags.patch
+	"${FILESDIR}"/${PN}-4.5.9-unistd.h.patch
 	)
 
 AUTOTOOLS_IN_SOURCE_BUILD=1