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authorJustin Lecher <jlec@gentoo.org>2015-02-18 08:43:25 +0000
committerJustin Lecher <jlec@gentoo.org>2015-02-18 08:43:25 +0000
commitd02393a3db37f197b28be747b53192b619cc8401 (patch)
tree5830e11595a20a3fd6c20f5dfb50cbb8e19324c9 /sci-libs/htslib
parentupdate meta info; use epatch (diff)
downloadhistorical-d02393a3db37f197b28be747b53192b619cc8401.tar.gz
historical-d02393a3db37f197b28be747b53192b619cc8401.tar.bz2
historical-d02393a3db37f197b28be747b53192b619cc8401.zip
Version BUmp, #540352
Package-Manager: portage-2.2.17/cvs/Linux x86_64 Manifest-Sign-Key: 0xB9D4F231BD1558AB!
Diffstat (limited to 'sci-libs/htslib')
-rw-r--r--sci-libs/htslib/ChangeLog8
-rw-r--r--sci-libs/htslib/Manifest32
-rw-r--r--sci-libs/htslib/htslib-1.2.1.ebuild21
3 files changed, 44 insertions, 17 deletions
diff --git a/sci-libs/htslib/ChangeLog b/sci-libs/htslib/ChangeLog
index b858d192c884..e8c1a7993d5c 100644
--- a/sci-libs/htslib/ChangeLog
+++ b/sci-libs/htslib/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-libs/htslib
# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/htslib/ChangeLog,v 1.6 2015/01/06 12:14:13 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/htslib/ChangeLog,v 1.7 2015/02/18 08:43:24 jlec Exp $
+
+*htslib-1.2.1 (18 Feb 2015)
+
+ 18 Feb 2015; Justin Lecher <jlec@gentoo.org> +htslib-1.2.1.ebuild:
+ Version BUmp, #540352
06 Jan 2015; Justin Lecher <jlec@gentoo.org> htslib-1.1.ebuild:
Fix broken delete of manpage
@@ -24,4 +29,3 @@
20 Sep 2014; Justin Lecher <jlec@gentoo.org> +htslib-1.0.ebuild,
+metadata.xml:
New addition, written by me
-
diff --git a/sci-libs/htslib/Manifest b/sci-libs/htslib/Manifest
index feccd733a93b..8e1ba911d9a5 100644
--- a/sci-libs/htslib/Manifest
+++ b/sci-libs/htslib/Manifest
@@ -3,26 +3,28 @@ Hash: SHA512
DIST htslib-1.0.tar.bz2 842174 SHA256 3d53fb081fafd930cadfee6f950faacc1993a0f4a9fa329fc897865fc6b331bc SHA512 aee7080a31c3fe5bd1fe4a16102da4aef7d415fd022781c1a5bdc1316ca50f8fcabbb95a39adc867e4eb5ac2d8ed63ab15ceafcd768e840d2593282916313507 WHIRLPOOL 512f4a95e98129151fef34fb90294138bc0aec40d5c2345d15d49ded02810c4663b8ff65726ced9f0d9ceb300295da066f6025d2b1966224937fc9ff58f2b58f
DIST htslib-1.1.tar.bz2 844870 SHA256 204e894074d9a864d27b607fda19f6240c5da351bb61bfc6c94beaa8790e4d58 SHA512 cde0b01583035f139203b8e9884dc97846bdf02fbb6dd2af74d0829270c2141ac490d0ca3ece4f9afd9d66d6af235452d3e94bbe0ea6e1a8625405735a813271 WHIRLPOOL 56e986cd7ee29d2d680ef55fd9128d4e43bacff4d72bc83df7b8c1e6c8d53b4a726c576d690dee272397778a6796096072fc3fffe4a4f1cbc0179a91fe9405b6
+DIST htslib-1.2.1.tar.bz2 911326 SHA256 bddb1372b9215b32e0f21d8394bab859c57cb00324a8dc06775cdac5b4d662b0 SHA512 23db1861cd08b503223f14dcbbdf9c6ae24dec648c987816abc47cc85fa7287c2405be72193cf492fff4f5991ff7b1f55dc386004588971a0e43a2f1c7355199 WHIRLPOOL d81f1cc74bb7e70d538f3e616f290a50017c56c517d9986f84c897b75524848135dd1788f92ff983c701ab7d5e84163123c570a200b83bea6a7922f4c1293107
EBUILD htslib-1.0.ebuild 944 SHA256 ee786f48b5581116c340f946c80f8c1f708c55eea81406d48f93c324054c2711 SHA512 562d15dbe04f4485710363423cb04da69cad3f685399a749f877690861ad1f05804a1c6ded669fc27a718ae4829d8de7eda3324522cd4a2c43ea9210bc38c62a WHIRLPOOL 2c3276d551ce29bbdd48c3f0d50aa3a69587e51f16e42b32cc4a6f8e2f0e8943c4d3888f8dd9e9be99d7c00b5fce3a1f131c59b5ed601787f7db05d124ee9fc0
EBUILD htslib-1.1.ebuild 893 SHA256 cc3f59e5e0f042ab6ea8c34a37821cda7dff09c6012b65121d5f6c96d87c76e4 SHA512 ea006e9d7d55bd43a22a5fe307c29418ca9e4b57fac00ffbb6199f33dc9bc7ce360fa51b078223c62ec0bfd4b47a31d8cfec71b278266c0d7bf0465078670395 WHIRLPOOL dfb58fd69bfc6e0b15c12117c42dac2c03d453da93b9d74e1d345159bd840690e6355f04e4652b216a12842584ca06792bdf4e06f2b0ad44f3db41cf8ffb0d77
-MISC ChangeLog 830 SHA256 0d030eb2b150e7b9455cfe349ab258a07383a2100ebb0b4971366088c64cea57 SHA512 e7cfbe36a41e8ddaca918ef5f39fc36cb4c08d9e61155b24dc133a7905f797e45b981cfa7262746a4ee056c4029adeca52f9e74a3650026eb61df04bd762ebe7 WHIRLPOOL 99d79f796cd1442c2931c3bb1031d956dca68db53d47c0f478e57d901f5975c587ad13e56139787b45bd35a5e58601a7df0c6f47b15f5247a7180179631942bf
+EBUILD htslib-1.2.1.ebuild 585 SHA256 36e29ef33eac5b7727d8de4b591dc2540558520f885f75760e85271d3c7980fe SHA512 c9fa93c75038d290b3051940db5e7113cf5dbb68f9d3875231df78e538652b70001870870e5721c691308cd348d79c5010c7e544bebe0f305fc71f4e45d3e6ea WHIRLPOOL e05b44b518b033376f54136e0e9dd128c0adb44b417604d5fa447627251710ea71a43178867ed0d66836377ed39aca66f891f16dd6525ac9f693ce1cebc76a5f
+MISC ChangeLog 952 SHA256 1eb12b8cc8b81e2bb7985df3f3d3a4f6c5112bc56354280edd77929f69b6ba7c SHA512 54018599096f39cb6e6b3f973da01bf8aa4dfe4e9a6bad9d21635a268adbc49c230e889a6dd801d9f635ad8e3822f021d2fa0251c7cac13f0adb82fe90bd97cb WHIRLPOOL 711280d0b1cd28861d708e55796a65628b63d070362146186761d8b107ec826985bfe435626bafc134bd9fbe8eb4915465b5716655178973873b1eb6993d2860
MISC metadata.xml 166 SHA256 29b228f683c71345323d841414e410c929a320f34536eb30910498728260c8ac SHA512 51c5345bb1c4466b73e2feac8895c64fc119365e7f2c156702f4c93664d3aba028b3da9daaabf24f61a88220345fca7806771a252e8ae906cac5dec97862c7e0 WHIRLPOOL 211bf955d94fc1d93b12388a2c597a8d440fb5d78f84d59b2549569537098c3525b1fbab707441d62fabe20edcac2fd9ebe09c5d9870f1c9558d7ee90d5db5b3
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diff --git a/sci-libs/htslib/htslib-1.2.1.ebuild b/sci-libs/htslib/htslib-1.2.1.ebuild
new file mode 100644
index 000000000000..47cc54b74c74
--- /dev/null
+++ b/sci-libs/htslib/htslib-1.2.1.ebuild
@@ -0,0 +1,21 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/htslib/htslib-1.2.1.ebuild,v 1.1 2015/02/18 08:43:24 jlec Exp $
+
+EAPI=5
+
+DESCRIPTION="C library for high-throughput sequencing data formats"
+HOMEPAGE="http://www.htslib.org/"
+SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"
+
+SLOT="0"
+LICENSE="MIT"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="static-libs"
+
+src_install() {
+ default
+ if ! use static-libs; then
+ find "${ED}" -type f -name "*.a" -delete || die
+ fi
+}